References

Stuart and Berry (2003). “A Comprehensive Whole Genome Bacterial Phylogeny Using Correlated Peptide Motifs Defined in a High Dimensional Vector Space”. J. of Bioinformatics and Computational Biology 1(3):475-493.

Stuart, Moffet and Berry (2002). “Integrated gene and species phylogenies from unaligned whole genome protein sequences”. Bioinformatics. 18:100-108.

Stuart, Moffet and Berry (2002). “A comprehensive vertebrate phylogeny using vector representations of protein sequences from whole genomes”. Mol. Biol. and Evol. 19:554-562.