See Google Scholar for publications prior to 2014
2014
- Dugan, V.G., Emrich, S.J. Giraldo-Calderón, G.I, Harb,
O.S. Newman, Rm. et al. Standardized Metadata for Human Pathogen/Vector Genomic Sequences
PloS ONE, 9(6): e99979.
- O'Neil, S.T., Dzurisin, J.D.K.,Williams, C.M., Lobo, N.F.,
Higgins, J.K., Deines, J.M., Carmichael, R.D., Zeng, E., Tan, J.C.,
Wu, G.C., Emrich, S.J. and J.J. Hellman. Gene expression in closely related species mirrors local adaptation: consequences for responses to a warming world.
Molecular Ecology 23(11): 2686-2698
- Geng, P., Li, W., Lin, L., de Miranda, J.R., Emrich, S., An,
L. and O. Terenius. Genetic characterization of a novel Iflavirus associated with vomiting disease in the Chinese Oak silkmoth Antheraea pernyi.
PloS ONE, 9(3), e92107.
- Warren, A., Aurrecoechea, C., Brunk, B., Desai, P., Emrich, S.,
Giraldo-Calderón, G.I., Harb, O., Hix, D., Lawson, D., Machi, D.,
Mao, C.. McClelland, M., Nordberg, E., Shukla, M., Vosshall, L.B.,
Wattam, A.R., Will, R., Yoo, H.S. and B. Sobral. RNA-Rocket: An RNA-Seq analysis resource for infectious disease research.
bioRxiv, 007963.
- Zhang, W., Zeng, E., Liu, D., Jones, S.E. and S.J. Emrich. Mapping genomic features to functional traits through microbial whole genome sequences.
International Journal of Bioinformatics Research and
Applications, 10(4):461-478.
- Thrasher, A., Musgrave, Z., Kachmark, B., Thain, D. and
S.J. Emrich. Scaling up genome annotation using MAKER and work
queue. International Journal of Bioinformatics Research and
Applications, 10(4):447-460.
- Livermore, J.A., Emrich, S.J., Tan, J. and S. E. Jones. Freshwater bacterial lifestyles inferred from comparative genomics. Environmental Microbiology, doi: 10.1111/1462-2920.12199.